Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR07317.1 | EAR07418.1 | MED297_12232 | MED297_19002 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Hypothetical protein; COG4585 Signal transduction histidine kinase. | 0.572 |
EAR07317.1 | EAR07984.1 | MED297_12232 | MED297_15480 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | COG0591 Na+/proline symporter. | 0.996 |
EAR07317.1 | EAR09148.1 | MED297_12232 | MED297_17438 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Hypothetical tryptophan-rich sensor protein; COG0642 Signal transduction histidine kinase. | 0.997 |
EAR07317.1 | EAR09720.1 | MED297_12232 | MED297_16214 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Two-component system regulatory protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.974 |
EAR07317.1 | EAR09721.1 | MED297_12232 | MED297_16219 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Two-component system sensor protein; COG4585 Signal transduction histidine kinase. | 0.572 |
EAR07317.1 | EAR10029.1 | MED297_12232 | MED297_08071 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | COG0642 Signal transduction histidine kinase. | 0.997 |
EAR07317.1 | EAR10337.1 | MED297_12232 | MED297_00910 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 0.997 |
EAR07317.1 | EAR10613.1 | MED297_12232 | MED297_11375 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | PAS; COG0642 Signal transduction histidine kinase. | 0.998 |
EAR07317.1 | EAR10909.1 | MED297_12232 | MED297_10376 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Putative Sensory box histidine kinase/response regulator; COG0591 Na+/proline symporter. | 0.996 |
EAR07317.1 | EAR11317.1 | MED297_12232 | MED297_20557 | GGDEF family protein; COG0642 Signal transduction histidine kinase. | Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 0.998 |
EAR07418.1 | EAR07317.1 | MED297_19002 | MED297_12232 | Hypothetical protein; COG4585 Signal transduction histidine kinase. | GGDEF family protein; COG0642 Signal transduction histidine kinase. | 0.572 |
EAR07418.1 | EAR07984.1 | MED297_19002 | MED297_15480 | Hypothetical protein; COG4585 Signal transduction histidine kinase. | COG0591 Na+/proline symporter. | 0.859 |
EAR07418.1 | EAR09148.1 | MED297_19002 | MED297_17438 | Hypothetical protein; COG4585 Signal transduction histidine kinase. | Hypothetical tryptophan-rich sensor protein; COG0642 Signal transduction histidine kinase. | 0.855 |
EAR07418.1 | EAR09720.1 | MED297_19002 | MED297_16214 | Hypothetical protein; COG4585 Signal transduction histidine kinase. | Two-component system regulatory protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.952 |
EAR07418.1 | EAR10029.1 | MED297_19002 | MED297_08071 | Hypothetical protein; COG4585 Signal transduction histidine kinase. | COG0642 Signal transduction histidine kinase. | 0.572 |
EAR07418.1 | EAR10337.1 | MED297_19002 | MED297_00910 | Hypothetical protein; COG4585 Signal transduction histidine kinase. | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 0.572 |
EAR07418.1 | EAR10613.1 | MED297_19002 | MED297_11375 | Hypothetical protein; COG4585 Signal transduction histidine kinase. | PAS; COG0642 Signal transduction histidine kinase. | 0.880 |
EAR07418.1 | EAR10909.1 | MED297_19002 | MED297_10376 | Hypothetical protein; COG4585 Signal transduction histidine kinase. | Putative Sensory box histidine kinase/response regulator; COG0591 Na+/proline symporter. | 0.859 |
EAR07418.1 | EAR11317.1 | MED297_19002 | MED297_20557 | Hypothetical protein; COG4585 Signal transduction histidine kinase. | Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 0.900 |
EAR07984.1 | EAR07317.1 | MED297_15480 | MED297_12232 | COG0591 Na+/proline symporter. | GGDEF family protein; COG0642 Signal transduction histidine kinase. | 0.996 |
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