STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR09081.1Hypothetical protein. (455 aa)    
Predicted Functional Partners:
EAR10026.1
Endo-1,4-beta-glucanase; COG2730 Endoglucanase.
    
 0.969
EAR10564.1
Regulatory P domain of the subtilisin-like proprotein convertase and other protease.
  
 0.959
EAR09080.1
Hypothetical protein; COG3000 Sterol desaturase.
 
     0.867
EAR11130.1
Hypothetical protein.
  
 0.794
EAR09022.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
 
 
 0.792
EAR07947.1
Hypothetical protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
   
 0.785
EAR08295.1
Hypothetical protein.
   
 0.785
EAR11279.1
COG1404 Subtilisin-like serine proteases.
   
 0.785
EAR10315.1
Putative chitinase C precursor; COG3979 Uncharacterized protein contain chitin-binding domain type 3; Belongs to the glycosyl hydrolase 18 family.
  
 
 0.775
EAR10712.1
Chitinase; COG3979 Uncharacterized protein contain chitin-binding domain type 3.
  
 
 0.775
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.