STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR07639.1Hypothetical protein. (323 aa)    
Predicted Functional Partners:
EAR07640.1
COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
  
  
 0.970
EAR10044.1
COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
  
  
 0.874
EAR07643.1
COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
 
   
 0.859
EAR07641.1
Hypothetical protein; COG2907 Predicted NAD/FAD-binding protein.
       0.776
EAR07642.1
Hypothetical protein.
       0.776
EAR07644.1
Hypothetical protein.
       0.735
EAR09562.1
Hypothetical protein.
 
     0.726
EAR07390.1
COG0492 Thioredoxin reductase.
   
   0.711
thiI
Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
 
     0.687
EAR09447.1
Hypothetical protein; COG0789 Predicted transcriptional regulators.
  
  
 0.615
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.