STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR08444.1Beta-mannosidase; COG3250 Beta-galactosidase/beta-glucuronidase. (819 aa)    
Predicted Functional Partners:
EAR10026.1
Endo-1,4-beta-glucanase; COG2730 Endoglucanase.
  
 
 0.883
EAR07231.1
COG3525 N-acetyl-beta-hexosaminidase.
 
 0.843
EAR07724.1
COG3534 Alpha-L-arabinofuranosidase.
 
  
 0.792
EAR10827.1
Tat (twin-arginine translocation) pathway signal sequence domain protein.
  
 0.736
EAR10564.1
Regulatory P domain of the subtilisin-like proprotein convertase and other protease.
  
 
 0.724
EAR08315.1
2-deoxy-D-gluconate 3-dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 
 0.697
EAR10660.1
PfkB; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family.
  
  
 0.681
EAR08443.1
Probable beta-hexosamidase A; COG1472 Beta-glucosidase-related glycosidases.
 
  
 0.646
EAR07748.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.639
EAR09461.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.639
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.