STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR07691.1Transcriptional activator protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (273 aa)    
Predicted Functional Partners:
EAR07690.1
COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.794
EAR08980.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.713
EAR09274.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.713
EAR09917.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.702
EAR10685.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.693
EAR10303.1
Putative transcriptional activator for lysine biosynthesis (LysR family) protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.689
EAR08904.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.685
EAR10018.1
Glycine cleavage system transcription activator; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.684
EAR08637.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.682
EAR09178.1
Substrate-binding transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.658
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.