STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR11071.1YD repeat; COG3209 Rhs family protein. (1098 aa)    
Predicted Functional Partners:
EAR11072.1
Putative rhs-related protein; COG3209 Rhs family protein.
     0.942
EAR11075.1
Putative rhs-related protein; COG3209 Rhs family protein.
 
     0.829
EAR11073.1
Probable rhs-related protein; COG3209 Rhs family protein.
 
     0.792
EAR11074.1
Putative rhs-related protein; COG3209 Rhs family protein.
 
     0.789
EAR11070.1
Hypothetical protein; COG1131 ABC-type multidrug transport system, ATPase component.
       0.773
EAR11093.1
Protein containing QXW lectin repeats.
 
 
 0.600
EAR09457.1
COG0110 Acetyltransferase (isoleucine patch superfamily).
   
    0.568
EAR11028.1
COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
 0.526
EAR10035.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
 0.502
EAR11314.1
Serine protease; COG2931 RTX toxins and related Ca2+-binding proteins.
  
 
 0.434
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.