STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR11089.1COG3151 Uncharacterized protein conserved in bacteria. (144 aa)    
Predicted Functional Partners:
EAR11088.1
Hypothetical protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
 
    0.905
EAR10528.1
COG3139 Uncharacterized protein conserved in bacteria.
  
     0.662
EAR10322.1
Hypothetical protein.
  
     0.657
EAR08378.1
COG3130 Ribosome modulation factor.
  
     0.646
EAR10349.1
COG0531 Amino acid transporters.
  
     0.625
EAR07364.1
COG3160 Regulator of sigma D; Belongs to the Rsd/AlgQ family.
  
     0.574
EAR11087.1
COG1538 Outer membrane protein.
       0.568
EAR11006.1
COG2959 Uncharacterized enzyme of heme biosynthesis.
  
     0.558
EAR10161.1
COG3105 Uncharacterized protein conserved in bacteria.
  
     0.534
EAR09825.1
COG3695 Predicted methylated DNA-protein cysteine methyltransferase.
  
    0.518
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.