STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR11101.1Hypothetical protein; COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases. (290 aa)    
Predicted Functional Partners:
EAR11260.1
COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
  0.505
EAR11102.1
COG3866 Pectate lyase.
       0.504
EAR09929.1
SPFH domain/Band 7 family protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
    0.415
EAR09930.1
SPFH domain/Band 7 family protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
    0.415
EAR08322.1
Hypothetical protein; COG1620 L-lactate permease.
  
     0.415
EAR09594.1
HflK; HflC and HflK could encode or regulate a protease.
  
    0.415
EAR09595.1
HflC protein; HflC and HflK could regulate a protease.
  
    0.415
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.