STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR11279.1COG1404 Subtilisin-like serine proteases. (667 aa)    
Predicted Functional Partners:
EAR11028.1
COG2931 RTX toxins and related Ca2+-binding proteins.
 
 0.821
EAR11314.1
Serine protease; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 0.815
EAR08095.1
Cytochrome c family protein.
   
 0.814
EAR11307.1
Hypothetical protein.
   
 0.814
EAR10035.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
 0.790
EAR10547.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
 0.790
EAR11093.1
Protein containing QXW lectin repeats.
  
 0.790
EAR08593.1
Hypothetical protein.
   
 0.785
EAR07252.1
Hypothetical protein.
   
 0.785
EAR10546.1
Hypothetical protein.
   
 0.785
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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