STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR11340.1COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. (178 aa)    
Predicted Functional Partners:
EAR11422.1
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
    
 0.860
EAR08225.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.818
EAR11341.1
Acetyltransferase, putative; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
 
  0.804
EAR07753.1
COG1605 Chorismate mutase.
    
  0.783
EAR10995.1
COG0067 Glutamate synthase domain 1.
   
 
 0.774
EAR11077.1
Glutamate synthase, large subunit, GOGAT; COG0067 Glutamate synthase domain 1.
   
 
 0.774
EAR10217.1
COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
  
   
 0.736
EAR07863.1
Ribosomal-protein-alanine N-acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
  
   
 0.731
EAR08644.1
COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
  
     0.704
EAR11342.1
Hypothetical protein; COG0841 Cation/multidrug efflux pump.
       0.620
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.