STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
EAQ98064.1Methyltransferase domain protein. (243 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase alpha subunit/glycine dehydrogenase (decarboxylating) beta subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.669
EAQ96284.1
Overlaps another CDS with the same product name; protoporphyrin IX magnesium-chelatase.
  
 0.643
EAQ98065.1
Acyl-CoA thioesterase.
  
    0.550
coq7
Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.529
EAQ98848.1
Putative FlgJ-related protein.
  
     0.468
EAQ98110.1
Hypothetical protein; DUF3237; Belongs to the UPF0311 family.
   
  0.425
EAQ96425.1
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; Overlaps another CDS with the same product name.
   
  0.425
EAQ96426.1
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; Overlaps another CDS with the same product name.
   
  0.425
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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