STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ98093.1RimK-like ATP-grasp domain protein. (308 aa)    
Predicted Functional Partners:
EAQ97386.1
Glutamate synthase (NADPH) large subunit.
    
  0.779
EAQ98092.2
3-4; variant 3 with third motif protein having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif protein having DxD or Dx(3-4)E.
       0.606
EAQ95753.1
Cyanophycin synthetase.
    
 0.541
EAQ97273.1
Putative bacterial sensory transduction regulator.
  
  
 0.469
EAQ98091.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
       0.439
EAQ97103.1
Gamma-glutamyltransferase.
  
  
 0.405
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.