Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ98141.2Hypothetical protein. (1011 aa)    
Predicted Functional Partners:
EAQ96539.2
Putative iron-regulated membrane protein.
 
     0.769
EAQ98866.1
Hypothetical protein; Related to penicillin acylase.
  
     0.739
EAQ99116.1
Hypothetical protein.
  
     0.732
EAQ96856.1
Xaa-Pro aminopeptidase.
  
     0.729
EAQ98129.1
Xaa-Pro aminopeptidase.
  
     0.728
EAQ98084.2
Hypothetical protein.
  
     0.703
EAQ98635.1
Hypothetical protein.
  
     0.695
EAQ98180.2
Hypothetical protein.
  
     0.657
EAQ96632.2
Imidazolonepropionase; And related amidohydrolases.
  
     0.655
EAQ96607.2
Hypothetical protein.
  
     0.640
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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