Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ98260.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
EAQ95715.1
Hypothetical protein.
  
     0.530
EAQ95797.1
Copper binding protein periplasmic protein CusF.
   
    0.515
EAQ97734.1
Copper binding protein periplasmic protein CusF.
   
    0.515
EAQ99562.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
    0.515
EAQ98634.1
Hypothetical protein.
  
     0.501
EAQ98261.1
Alkyl sulfatase; And related hydrolases.
       0.499
EAQ96737.1
TRAP-type uncharacterized transport system, periplasmic component.
  
    0.496
EAQ98637.1
Putative MetA-pathway of phenol degradation.
  
     0.492
EAQ97273.1
Putative bacterial sensory transduction regulator.
  
     0.489
EAQ96319.1
Hypothetical protein.
  
     0.472
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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