STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ98278.1Transcriptional regulator, ArsR family. (101 aa)    
Predicted Functional Partners:
EAQ98275.2
Monoheme cytochrome SoxX (sulfur oxidation).
 
     0.582
EAQ98277.1
Sulfite oxidase; And related enzymes; sulfur dehydrogenase subunit SoxC.
     
 0.578
EAQ98276.2
Cytochrome c5.
       0.554
EAQ98274.2
Thiosulfate-binding protein SoxY.
       0.528
EAQ98272.2
Diheme cytochrome SoxA (sulfur oxidation).
 
     0.485
EAQ98273.1
Sulfur compound chelating protein SoxZ.
       0.470
EAQ98279.2
Long-chain fatty acid transport protein.
       0.458
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.