STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ98297.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (309 aa)    
Predicted Functional Partners:
EAQ97592.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.729
EAQ95810.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.660
EAQ99517.2
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.620
EAQ97386.1
Glutamate synthase (NADPH) large subunit.
 
   
 0.555
EAQ98296.1
Sulfate permease; And related transporters (MFS superfamily).
       0.527
EAQ98050.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.517
EAQ98298.1
Hypothetical protein.
       0.496
EAQ98300.1
Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA.
 
     0.477
EAQ98295.1
Hypothetical protein.
       0.438
EAQ98299.1
Enoyl-CoA hydratase/carnithine racemase.
       0.410
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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