Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ98300.1Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA. (207 aa)    
Predicted Functional Partners:
EAQ98301.1
Hypothetical protein.
       0.821
EAQ98299.1
Enoyl-CoA hydratase/carnithine racemase.
       0.773
EAQ98298.1
Hypothetical protein.
       0.623
EAQ98297.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.477
EAQ97761.1
Hypothetical protein.
  
     0.441
EAQ98128.1
Aminopeptidase N.
  
     0.412
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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