STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ96685.1Hypothetical protein. (296 aa)    
Predicted Functional Partners:
EAQ96684.1
Hypothetical protein; DUF1353.
       0.645
EAQ96683.2
Putative Zn-dependent hydrolase of the beta-lactamase fold protein.
       0.608
EAQ96682.2
Hypothetical protein.
       0.546
EAQ95872.1
Outer membrane receptor protein, mostly Fe transport.
  
     0.492
EAQ96686.2
Hypothetical protein.
       0.481
EAQ99509.2
Spondin N.
  
   
 0.422
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.