Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ97320.1PAS domain protein S-box. (375 aa)    
Predicted Functional Partners:
EAQ98811.2
Diguanylate cyclase (GGDEF) domain protein.
  
 0.988
EAQ98346.1
Signal transduction histidine kinase.
 
 0.985
EAQ97245.1
Signal transduction histidine kinase.
 
 0.979
EAQ96635.1
Signal transduction histidine kinase.
 
0.972
EAQ98844.1
PAS domain protein S-box.
 
 0.972
EAQ97771.1
PAS domain protein S-box/diguanylate cyclase (GGDEF) domain protein.
  
 0.964
EAQ98075.2
Diguanylate cyclase (GGDEF) domain protein.
  
 0.962
EAQ95890.1
GAF domain protein; FOG.
  
 0.962
EAQ99511.1
Signal transduction histidine kinase.
   
 0.947
EAQ98219.1
PAS domain protein S-box/diguanylate cyclase (GGDEF) domain protein.
  
 0.942
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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