Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EAQ98808.1Cupin-like domain protein. (299 aa)    
Predicted Functional Partners:
EAQ98807.2
Chalcone-flavanone isomerase.
       0.773
EAQ98809.2
Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily).
       0.773
rplP
LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
    
   0.723
EAQ98810.1
Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily).
       0.642
idi
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
 
     0.481
EAQ97453.2
Putative acyltransferase.
 
     0.458
EAQ97337.1
DNA-N1-methyladenine dioxygenase.
  
     0.455
EAQ98480.1
Phenylalanine-4-hydroxylase.
  
     0.453
EAQ98805.1
Mn-dependent transcriptional regulator.
       0.404
EAQ98806.1
Hypothetical protein.
       0.404
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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