STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ98831.1Response regulator; Containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (183 aa)    
Predicted Functional Partners:
EAQ98832.1
Sigma-54 interaction domain protein/Bacterial regulatory protein, Fis family.
     0.991
EAQ97771.1
PAS domain protein S-box/diguanylate cyclase (GGDEF) domain protein.
  
 0.966
EAQ98811.2
Diguanylate cyclase (GGDEF) domain protein.
  
 0.964
EAQ96635.1
Signal transduction histidine kinase.
  
 0.897
EAQ98346.1
Signal transduction histidine kinase.
  
 0.823
EAQ98995.1
RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.820
EAQ97245.1
Signal transduction histidine kinase.
  
 0.799
EAQ95890.1
GAF domain protein; FOG.
   
 0.794
EAQ99511.1
Signal transduction histidine kinase.
   
 0.718
EAQ98830.2
Hypothetical protein.
       0.701
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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