STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ98913.1O-Antigen ligase. (442 aa)    
Predicted Functional Partners:
EAQ98894.1
Sugar transferase; PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.951
EAQ98909.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
 
  0.930
EAQ98908.1
Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily.
 
   
 0.916
EAQ98912.2
Acetyltransferase (GNAT) domain protein.
 
   
 0.907
EAQ98910.2
Hypothetical protein.
 
 
  0.898
EAQ98905.1
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
 
  
 0.849
EAQ98904.2
Putative polysaccharide export protein, PEP-CTERM sytem-associated.
 
  
 0.824
EAQ98911.1
Putative carbamoyl transferase, NodU family.
       0.785
EAQ98906.1
exopolysaccharide/PEPCTERM locus tyrosine autokinase.
 
  
 0.775
EAQ98933.1
Protein involved in cellulose biosynthesis (CelD).
 
     0.775
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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