Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ96840.1Flagellar motor protein. (216 aa)    
Predicted Functional Partners:
EAQ97771.1
PAS domain protein S-box/diguanylate cyclase (GGDEF) domain protein.
  
  
 0.972
EAQ98421.1
Flagellar motor component.
 
 0.955
EAQ98425.1
Flagellar motor component.
 
 0.952
EAQ96839.1
Hypothetical protein.
 
    0.946
EAQ96841.1
Hypothetical protein; DUF2894.
 
     0.945
EAQ96838.2
Hypothetical protein; DUF3348.
 
     0.943
EAQ98811.2
Diguanylate cyclase (GGDEF) domain protein.
  
  
 0.838
EAQ98464.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.775
EAQ98450.1
Flagellar biosynthetic protein FliS.
  
  
 0.774
EAQ98456.2
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
  
  
 0.770
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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