STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ97090.2Type IV secretory pathway, VirB2 component (pilins). (128 aa)    
Predicted Functional Partners:
EAQ97092.1
Type IV secretory pathway, VirB4 component.
 
 
 0.979
EAQ97091.1
Type IV secretory pathway, TrbD component.
 
  
 0.977
EAQ97097.1
P-type conjugative transfer protein TrbG.
 
  
 0.977
EAQ97089.1
P-type conjugative transfer ATPase TrbB.
 
  
 0.976
EAQ97093.1
P-type conjugative transfer protein TrbJ.
 
  
 0.975
EAQ97098.1
Type IV secretory pathway, VirB10 component.
 
  
 0.974
EAQ97095.1
P-type conjugative transfer protein TrbL.
 
  
 0.972
EAQ97096.1
Type IV secretory pathway, TrbF component.
 
  
 0.970
EAQ97087.1
Type IV secretory pathway, VirD4 component.
 
   
 0.956
EAQ97088.1
Ribbon-helix-helix protein, copG family.
 
     0.953
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.