STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ97786.2PEP-CTERM protein sorting domain protein. (260 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.719
EAQ98668.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.663
EAQ97454.1
Lysophospholipase L1; And related esterases.
   
 0.662
EAQ98917.1
Lysophospholipase L1; And related esterases.
   
 0.662
EAQ99312.1
Lysophospholipase L1; And related esterases.
   
 0.662
EAQ99530.1
Hypothetical protein.
  
 0.510
EAQ98811.2
Diguanylate cyclase (GGDEF) domain protein.
  
  
 0.475
EAQ98346.1
Signal transduction histidine kinase.
     
 0.455
EAQ98939.2
Hypothetical protein.
  
 0.435
EAQ95894.2
Hypothetical protein; DUF1592; DUF1595; DUF1588; DUF1585.
  
 0.435
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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