STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ99267.2Putative methyltransferase. (271 aa)    
Predicted Functional Partners:
EAQ96602.1
Outer membrane cobalamin receptor protein.
  
     0.724
EAQ99266.1
Hypothetical protein.
       0.709
EAQ96411.2
Outer membrane cobalamin receptor protein.
  
     0.685
EAQ96717.1
Hypothetical protein.
  
    0.636
EAQ97249.1
Outer membrane receptor for ferrienterochelin and colicin.
  
     0.625
EAQ97775.1
Outer membrane receptor protein, mostly Fe transport.
  
     0.623
EAQ95758.1
Outer membrane receptor for ferrienterochelin and colicin.
  
     0.623
EAQ96455.1
Outer membrane receptor protein, mostly Fe transport.
  
     0.614
EAQ98077.2
Hypothetical protein.
  
     0.612
EAQ96441.2
Cytochrome c biogenesis factor.
  
     0.608
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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