STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ99556.1Cupredoxin-like domain protein. (117 aa)    
Predicted Functional Partners:
EAQ99555.1
Nitrogen regulatory protein P-II family.
 
     0.901
EAQ99554.1
Hypothetical protein; DUF2933.
 
     0.891
EAQ95806.2
Copper-(or silver)-translocating P-type ATPase.
 
    0.840
EAQ99553.1
Putative protein-S-isoprenylcysteine methyltransferase.
 
     0.824
EAQ99551.1
Hypothetical protein.
 
     0.750
EAQ99559.2
Transcriptional regulator, MerR family.
 
     0.713
EAQ99558.2
Copper chaperone.
 
    0.710
EAQ99552.1
Hypothetical protein.
       0.675
EAQ99547.1
Hypothetical protein.
 
     0.580
EAQ99563.1
Outer membrane protein.
 
  
  0.496
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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