STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ99556.1Cupredoxin-like domain protein. (117 aa)    
Predicted Functional Partners:
EAQ99555.1
Nitrogen regulatory protein P-II family.
 
     0.900
EAQ99554.1
Hypothetical protein; DUF2933.
 
     0.889
EAQ95806.2
Copper-(or silver)-translocating P-type ATPase.
 
    0.837
EAQ99553.1
Putative protein-S-isoprenylcysteine methyltransferase.
 
     0.820
EAQ99551.1
Hypothetical protein.
 
     0.750
EAQ99559.2
Transcriptional regulator, MerR family.
 
     0.735
EAQ99558.2
Copper chaperone.
 
    0.723
EAQ99552.1
Hypothetical protein.
       0.676
EAQ99547.1
Hypothetical protein.
 
     0.569
EAQ99549.1
TC 2.A.3; amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3).
 
     0.417
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.