STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ99562.1RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (533 aa)    
Predicted Functional Partners:
EAQ95665.2
Heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.989
EAQ99563.1
Outer membrane protein.
 
 0.978
EAQ97732.2
Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.922
EAQ95799.2
Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.921
ESZ89437.1
Putative silver efflux pump.
 
 0.918
EAQ95779.1
Heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.908
EAQ99561.2
Heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.907
EAQ95802.2
Outer membrane protein.
 
 0.854
EAQ97730.2
Outer membrane protein.
 
 0.852
EAQ98960.2
Type I secretion outer membrane protein, TolC family.
  
 0.831
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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