Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ95932.1DNA repair protein radc; Belongs to the UPF0758 family. (171 aa)    
Predicted Functional Partners:
EAQ98984.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.681
EAQ97941.1
MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.
 
  
 0.638
EAQ98986.1
MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.585
EAQ97574.1
DNA protecting protein DprA.
  
  
 0.548
EAQ95934.1
Plasmid segregation actin-type ATPase ParM.
 
     0.540
EAQ97499.2
Serine phosphatase.
   
    0.531
EAQ95931.1
Hypothetical protein.
       0.531
EAQ95933.1
Hypothetical protein; DUF3577.
       0.518
EAQ95935.1
Integrating conjugative element protein family; PFL_4669.
 
     0.475
ESZ89401.1
Hypothetical protein.
       0.459
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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