STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ95765.2Sel1 repeat protein. (258 aa)    
Predicted Functional Partners:
EAQ95764.1
Conserved protein/domain protein typically associated with flavoprotein oxygenase, DIM6/NTAB family.
       0.757
EAQ98123.2
L-proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.748
EAQ98464.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.726
EAQ95763.1
Enoyl-CoA hydratase/carnithine racemase.
 
     0.726
mnmG
Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
   0.627
EAQ98811.2
Diguanylate cyclase (GGDEF) domain protein.
   
 0.566
EAQ98497.2
Mannose-6-phosphate isomerase, type 2.
  
  
 0.495
EAQ99007.1
Trypsin-like serine protease, typically periplasmic; Contains C-terminal PDZ domain.
  
 
 0.471
EAQ95766.1
Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
    0.458
EAQ99085.2
Trypsin-like serine protease, typically periplasmic; Contains C-terminal PDZ domain; DegP2 peptidase. Serine peptidase. MEROPS family S01B.
  
 
 0.449
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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