STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS47687.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
EAS47685.1
COG3219 Uncharacterized protein conserved in bacteria.
 
  
 0.932
EAS47686.1
COG3220 Uncharacterized protein conserved in bacteria.
 
  
 0.926
EAS46546.1
Hypothetical protein.
 
  
 0.856
EAS48013.1
COG3151 Uncharacterized protein conserved in bacteria.
  
     0.638
EAS47050.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.558
EAS48001.1
TPR repeats containing protein; COG0457 FOG: TPR repeat.
  
     0.533
EAS47051.1
Hypothetical protein.
  
     0.496
EAS46240.1
Hypothetical protein.
  
     0.478
EAS47688.1
COG1643 HrpA-like helicases.
       0.467
dnaQ
DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.
       0.467
Your Current Organism:
gamma proteobacterium HTCC2207
NCBI taxonomy Id: 314287
Other names: g. proteobacterium HTCC2207, marine gamma proteobacterium HTCC2207
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.