STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS46596.1COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. (406 aa)    
Predicted Functional Partners:
EAS46597.1
COG1716 FOG: FHA domain.
 
  
  0.957
EAS46862.1
COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family.
  
  
 
0.910
EAS46859.1
Hypothetical protein; COG3073 Negative regulator of sigma E activity.
  
 
 0.822
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.636
EAS46598.1
Putative sodium/alanine symporter family protein; COG1115 Na+/alanine symporter.
       0.547
EAS47959.1
Hypothetical protein.
  
 
   0.543
EAS46675.1
Hypothetical protein; COG2030 Acyl dehydratase.
  
 
  0.497
EAS48131.1
Sensor histidine kinase with a response regulator receiver domain; COG0642 Signal transduction histidine kinase.
  
  
 0.470
EAS48255.1
Peptidase, S1C (protease Do) subfamily protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
  
 
0.468
EAS46595.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
     
 0.459
Your Current Organism:
gamma proteobacterium HTCC2207
NCBI taxonomy Id: 314287
Other names: g. proteobacterium HTCC2207, marine gamma proteobacterium HTCC2207
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.