STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS47797.1Hypothetical protein; COG2267 Lysophospholipase. (319 aa)    
Predicted Functional Partners:
EAS46702.1
Formate dehydrogenase, beta subunit; COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit.
   
   0.930
EAS46703.1
COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
   
   0.905
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.799
EAS46264.1
Hypothetical protein.
   
  0.799
EAS47682.1
COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
     0.728
EAS46586.1
Ubiquinol--cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
    0.715
EAS47880.1
COG3312 F0F1-type ATP synthase, subunit I.
  
     0.640
EAS47683.1
Response regulator; COG2208 Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.597
EAS47910.1
Hypothetical protein; COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain.
  
     0.571
polA
Putative DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
 
   0.532
Your Current Organism:
gamma proteobacterium HTCC2207
NCBI taxonomy Id: 314287
Other names: g. proteobacterium HTCC2207, marine gamma proteobacterium HTCC2207
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.