STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS47929.1Thiol:disulfide interchange protein DsbA; COG0526 Thiol-disulfide isomerase and thioredoxins. (213 aa)    
Predicted Functional Partners:
dsbB
Protein-disulfide reductase; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.
 
 
 0.977
EAS47722.1
C-type cytochrome biogenesis protein; COG4232 Thiol:disulfide interchange protein.
  
 
 0.909
EAS47928.1
COG2863 Cytochrome c553.
 
     0.752
EAS46013.1
COG2976 Uncharacterized protein conserved in bacteria.
  
     0.749
bamE
Outer membrane lipoprotein OmlA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
    0.748
ftsQ
Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.
  
   
 0.671
EAS46588.1
COG2969 Stringent starvation protein B.
  
     0.627
lptD
Organic solvent tolerance protein, putative; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
 
   
 0.610
EAS48249.1
Toluene tolerance protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
 
    0.603
EAS46541.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.599
Your Current Organism:
gamma proteobacterium HTCC2207
NCBI taxonomy Id: 314287
Other names: g. proteobacterium HTCC2207, marine gamma proteobacterium HTCC2207
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.