STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS48133.1ABC transporter permease protein; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family. (308 aa)    
Predicted Functional Partners:
EAS48134.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
EAS48132.1
Amide-urea binding protein; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.998
EAS48135.1
Branched-chain amino acid transport system ATP-binding protein; COG4674 Uncharacterized ABC-type transport system, ATPase component.
 
 0.996
EAS48136.1
Putative ATP-binding component of ABC transporter; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.996
EAS48138.1
Putative formamidase regulatory protein FmdB.
 
     0.845
EAS48131.1
Sensor histidine kinase with a response regulator receiver domain; COG0642 Signal transduction histidine kinase.
 
  
  0.815
EAS48130.1
Hypothetical protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
  
  0.764
EAS48137.1
Formamidase; COG2421 Predicted acetamidase/formamidase.
 
     0.648
EAS45954.1
Probable ATP-binding component of ABC transporter; COG1131 ABC-type multidrug transport system, ATPase component.
    
  0.549
EAS46507.1
AzlC family protein; COG1296 Predicted branched-chain amino acid permease (azaleucine resistance).
    
  0.545
Your Current Organism:
gamma proteobacterium HTCC2207
NCBI taxonomy Id: 314287
Other names: g. proteobacterium HTCC2207, marine gamma proteobacterium HTCC2207
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