STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS48239.1Hypothetical protein; Displays ATPase and GTPase activities. (286 aa)    
Predicted Functional Partners:
EAS48240.1
COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
  
  
 0.954
EAS48241.1
S30EA ribosomal protein; COG1544 Ribosome-associated protein Y (PSrp-1).
  
  
 0.881
EAS48238.1
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
  
  
 0.872
EAS48233.1
Cytoplasmic axial filament protein; COG1530 Ribonucleases G and E.
  
 
 
 0.846
rne
Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.
  
 
 
 0.839
EAS48242.1
DNA-directed RNA polymerase subunit N; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.778
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
     0.641
EAS48236.1
COG3028 Uncharacterized protein conserved in bacteria; Belongs to the UPF0307 family.
       0.620
EAS48237.1
Mg/Co/Ni transporter MgtE; Acts as a magnesium transporter.
       0.620
EAS48247.1
Hypothetical protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation.
       0.592
Your Current Organism:
gamma proteobacterium HTCC2207
NCBI taxonomy Id: 314287
Other names: g. proteobacterium HTCC2207, marine gamma proteobacterium HTCC2207
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.