STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAS47291.1Fimbrial protein; COG4969 Tfp pilus assembly protein, major pilin PilA; Belongs to the N-Me-Phe pilin family. (157 aa)    
Predicted Functional Partners:
EAS46891.1
Type 4 fimbrial biogenesis protein PilQ; COG4796 Type II secretory pathway, component HofQ.
 
   
 0.661
EAS46887.1
COG4972 Tfp pilus assembly protein, ATPase PilM.
 
   
 0.508
EAS47288.1
Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.487
EAS46459.1
General secretion pathway protein G; COG2165 Type II secretory pathway, pseudopilin PulG.
   
 0.474
EAS46460.1
Hypothetical protein.
   
 0.461
EAS46461.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
   
 0.461
EAS46889.1
COG3167 Tfp pilus assembly protein PilO.
  
   
 0.442
EAS46888.1
COG3166 Tfp pilus assembly protein PilN.
  
   
 0.417
Your Current Organism:
gamma proteobacterium HTCC2207
NCBI taxonomy Id: 314287
Other names: g. proteobacterium HTCC2207, marine gamma proteobacterium HTCC2207
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.