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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tag13-methyl-adenine DNA glycosylase I. (181 aa)    
Predicted Functional Partners:
tag2
3-methyl-adenine DNA glycosylase I.
  
  
 
0.913
guaA
Guanosine monophosphate synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP.
      0.842
usp5
Similar to universal stress protein, UspA family.
       0.656
polA
DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.628
LCA_0040
5 Proteins of unknown function that are similar to other proteins.
       0.595
LCA_0037
Putative ion Mg(2+)/Co(2+) transport protein.
  
    0.451
LCA_1476
Putative A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
    
 0.432
argR
Putative transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes.
  
    0.401
Your Current Organism:
Lactobacillus sakei
NCBI taxonomy Id: 314315
Other names: L. sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei str. 23K, Lactobacillus sakei subsp. sakei strain 23K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.