Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| adhE | arcR | LCA_0379 | LCA_0375 | Bifunctional enzyme: alcohol dehydrogenase, acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Arginine deiminase pathway transcriptional regulator, Crp family. | 0.514 |
| adhE | arcT | LCA_0379 | LCA_0373 | Bifunctional enzyme: alcohol dehydrogenase, acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Putative aminotransferase. | 0.622 |
| arcA | arcB | LCA_0370 | LCA_0371 | Arginine deiminase (Arginine dihydrolase). | Ornithine transcarbamoylase (Catabolic OTCase); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.999 |
| arcA | arcC | LCA_0370 | LCA_0372 | Arginine deiminase (Arginine dihydrolase). | Carbamate kinase; Belongs to the carbamate kinase family. | 0.981 |
| arcA | arcD | LCA_0370 | LCA_0374 | Arginine deiminase (Arginine dihydrolase). | Arginine/ornithine antiporter. | 0.972 |
| arcA | arcR | LCA_0370 | LCA_0375 | Arginine deiminase (Arginine dihydrolase). | Arginine deiminase pathway transcriptional regulator, Crp family. | 0.857 |
| arcA | arcT | LCA_0370 | LCA_0373 | Arginine deiminase (Arginine dihydrolase). | Putative aminotransferase. | 0.898 |
| arcA | argR | LCA_0370 | LCA_0615 | Arginine deiminase (Arginine dihydrolase). | Putative transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | 0.649 |
| arcA | argR-2 | LCA_0370 | LCA_0681 | Arginine deiminase (Arginine dihydrolase). | Putative transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | 0.649 |
| arcA | argS | LCA_0370 | LCA_1421 | Arginine deiminase (Arginine dihydrolase). | Arginyl-tRNA synthetase. | 0.655 |
| arcA | nhaC | LCA_0370 | LCA_1827 | Arginine deiminase (Arginine dihydrolase). | Na(+)/H(+) antiporter. | 0.483 |
| arcB | arcA | LCA_0371 | LCA_0370 | Ornithine transcarbamoylase (Catabolic OTCase); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine deiminase (Arginine dihydrolase). | 0.999 |
| arcB | arcC | LCA_0371 | LCA_0372 | Ornithine transcarbamoylase (Catabolic OTCase); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamate kinase; Belongs to the carbamate kinase family. | 0.996 |
| arcB | arcD | LCA_0371 | LCA_0374 | Ornithine transcarbamoylase (Catabolic OTCase); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine/ornithine antiporter. | 0.902 |
| arcB | arcR | LCA_0371 | LCA_0375 | Ornithine transcarbamoylase (Catabolic OTCase); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine deiminase pathway transcriptional regulator, Crp family. | 0.831 |
| arcB | arcT | LCA_0371 | LCA_0373 | Ornithine transcarbamoylase (Catabolic OTCase); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Putative aminotransferase. | 0.883 |
| arcB | argR | LCA_0371 | LCA_0615 | Ornithine transcarbamoylase (Catabolic OTCase); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Putative transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | 0.805 |
| arcB | argR-2 | LCA_0371 | LCA_0681 | Ornithine transcarbamoylase (Catabolic OTCase); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Putative transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | 0.805 |
| arcB | argS | LCA_0371 | LCA_1421 | Ornithine transcarbamoylase (Catabolic OTCase); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginyl-tRNA synthetase. | 0.635 |
| arcB | nhaC | LCA_0371 | LCA_1827 | Ornithine transcarbamoylase (Catabolic OTCase); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Na(+)/H(+) antiporter. | 0.622 |
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