STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCA_0411Hypothetical extracellular protein precursor. (144 aa)    
Predicted Functional Partners:
LCA_0412
Hypotehtical extracellular protein precursor.
  
  
 0.939
LCA_0410
Putative mechanosensitive ion chanel.
 
    0.796
LCA_0792
5 Proteins of unknown function that are similar to other proteins.
  
     0.742
ezrA
Putative negative regulator of septum ring formation; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.741
LCA_0020
Hypothetical integral membrane protein.
  
     0.685
LCA_1446
5 Proteins of unknown function that are similar to other proteins.
  
     0.654
LCA_1386
5 Proteins of unknown function that are similar to other proteins.
  
     0.648
LCA_0630
Putative drug ABC exporter, membrane-spanning/permease subunit.
  
     0.633
LCA_0512
5 Proteins of unknown function that are similar to other proteins.
 
     0.606
LCA_0409
Hypothetical integral membrane protein.
 
     0.592
Your Current Organism:
Lactobacillus sakei
NCBI taxonomy Id: 314315
Other names: L. sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei str. 23K, Lactobacillus sakei subsp. sakei strain 23K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.