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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (388 aa)    
Predicted Functional Partners:
galT
Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase).
 
 0.999
galM
Aldose 1-epimerase (mutarotase); Catalyzes the interconversion of alpha and beta anomers of maltose.
 0.999
galE1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.976
galR
Galactose operon transcriptional regulator, LacI family.
 
  
 0.953
galE2
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.901
LCA_0983
Putative aldose-1 epimerase.
  
 0.885
lacL
Beta-galactosidase, large subunit (Lactase, large subunit).
 
  
 0.807
lacM
Beta-galactosidase, small subunit (Lactase, small subunit).
 
  
 0.756
fruA
Fructose-specific phosphotransferase system, enzyme IIABC.
     
 0.726
LCA_1789
Putative transcriptional regulator with a sugar-binding domain, LacI family.
 
  
 0.589
Your Current Organism:
Lactobacillus sakei
NCBI taxonomy Id: 314315
Other names: L. sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei str. 23K, Lactobacillus sakei subsp. sakei strain 23K
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