close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCA_0860Putative amino acid ABC transporter, substrate-binding lipoprotein precursor. (267 aa)    
Predicted Functional Partners:
LCA_0858
Putative amino acid ABC transporter, membrane-spanning subunit.
 0.999
ls859
Putative amino acid ABC transporter, ATP-binding subunit.
 
 
 0.988
LCA_1056
Putative amino acid ABC transporter, ATP-binding subunit.
 
 
 0.842
LCA_1496
Putative glutamine/glutamate ABC transporter, ATP-binding subunit.
 
 
 0.842
cls1
Cardiolipin synthetase (Phospholipase D family); Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
     
 0.753
minD
Septum formation-inhibiting ATPase, ATPase ParA-type.
       0.612
minC
Septum site-determining protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
       0.611
mreC
Cell shape determining lipoprotein precursor; Involved in formation and maintenance of cell shape.
       0.579
mreD
Cell shape determining protein.
       0.579
LCA_1114
Putative methionine ABC transporter, substrate binding lipoprotein precursor; Belongs to the nlpA lipoprotein family.
  
  
 0.555
Your Current Organism:
Lactobacillus sakei
NCBI taxonomy Id: 314315
Other names: L. sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei str. 23K, Lactobacillus sakei subsp. sakei strain 23K
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.