sigA protein (Lactobacillus sakei) - STRING interaction network

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sigA

DNA-directed RNA polymerase sigma factor, sigma A (Primary sigma factor); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (369 aa)

Predicted Functional Partners:

dnaG

0.994

rpoB

0.962

rpoC

0.957

rpoA

0.954

rpoZ

0.953

glyS

0.713

glyQ

0.702

ybeY

0.701

polA

0.670

guaA

0.664

Your Current Organism:

Lactobacillus sakei

NCBI taxonomy Id: 314315
Other names: L. sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei str. 23K, Lactobacillus sakei subsp. sakei strain 23K

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dnaG	glyQ	LCA_0883	LCA_0880	DNA primase G; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	Glycyl-tRNA synthetase, alpha subunit.	0.703
dnaG	glyS	LCA_0883	LCA_0881	DNA primase G; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	Glycyl-tRNA synthetase, beta subunit.	0.703
dnaG	polA	LCA_0883	LCA_1406	DNA primase G; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.955
dnaG	rpoC	LCA_0883	LCA_1774	DNA primase G; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.404
dnaG	sigA	LCA_0883	LCA_0884	DNA primase G; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase sigma factor, sigma A (Primary sigma factor); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.994
dnaG	ybeY	LCA_0883	LCA_0876	DNA primase G; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.600
glyQ	dnaG	LCA_0880	LCA_0883	Glycyl-tRNA synthetase, alpha subunit.	DNA primase G; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.703
glyQ	glyS	LCA_0880	LCA_0881	Glycyl-tRNA synthetase, alpha subunit.	Glycyl-tRNA synthetase, beta subunit.	0.999
glyQ	guaA	LCA_0880	LCA_0139	Glycyl-tRNA synthetase, alpha subunit.	Guanosine monophosphate synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP.	0.713
glyQ	sigA	LCA_0880	LCA_0884	Glycyl-tRNA synthetase, alpha subunit.	DNA-directed RNA polymerase sigma factor, sigma A (Primary sigma factor); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.702
glyQ	ybeY	LCA_0880	LCA_0876	Glycyl-tRNA synthetase, alpha subunit.	Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.762
glyS	dnaG	LCA_0881	LCA_0883	Glycyl-tRNA synthetase, beta subunit.	DNA primase G; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.703
glyS	glyQ	LCA_0881	LCA_0880	Glycyl-tRNA synthetase, beta subunit.	Glycyl-tRNA synthetase, alpha subunit.	0.999
glyS	guaA	LCA_0881	LCA_0139	Glycyl-tRNA synthetase, beta subunit.	Guanosine monophosphate synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP.	0.504
glyS	sigA	LCA_0881	LCA_0884	Glycyl-tRNA synthetase, beta subunit.	DNA-directed RNA polymerase sigma factor, sigma A (Primary sigma factor); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.713
glyS	ybeY	LCA_0881	LCA_0876	Glycyl-tRNA synthetase, beta subunit.	Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.762
guaA	glyQ	LCA_0139	LCA_0880	Guanosine monophosphate synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP.	Glycyl-tRNA synthetase, alpha subunit.	0.713
guaA	glyS	LCA_0139	LCA_0881	Guanosine monophosphate synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP.	Glycyl-tRNA synthetase, beta subunit.	0.504
guaA	polA	LCA_0139	LCA_1406	Guanosine monophosphate synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP.	DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.830
guaA	rpoA	LCA_0139	LCA_1739	Guanosine monophosphate synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.890

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