Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LCA_1523 | LCA_1524 | LCA_1523 | LCA_1524 | 6 Protein of unknown function, without similarity to other proteins. | 5 Proteins of unknown function that are similar to other proteins. | 0.475 |
| LCA_1523 | LCA_1525 | LCA_1523 | LCA_1525 | 6 Protein of unknown function, without similarity to other proteins. | Small multidrug resistance efflux protein, SMR family. | 0.441 |
| LCA_1523 | pepS | LCA_1523 | LCA_1522 | 6 Protein of unknown function, without similarity to other proteins. | Aminopeptidase S. | 0.723 |
| LCA_1524 | LCA_1523 | LCA_1524 | LCA_1523 | 5 Proteins of unknown function that are similar to other proteins. | 6 Protein of unknown function, without similarity to other proteins. | 0.475 |
| LCA_1524 | LCA_1525 | LCA_1524 | LCA_1525 | 5 Proteins of unknown function that are similar to other proteins. | Small multidrug resistance efflux protein, SMR family. | 0.709 |
| LCA_1524 | pepS | LCA_1524 | LCA_1522 | 5 Proteins of unknown function that are similar to other proteins. | Aminopeptidase S. | 0.449 |
| LCA_1525 | LCA_1523 | LCA_1525 | LCA_1523 | Small multidrug resistance efflux protein, SMR family. | 6 Protein of unknown function, without similarity to other proteins. | 0.441 |
| LCA_1525 | LCA_1524 | LCA_1525 | LCA_1524 | Small multidrug resistance efflux protein, SMR family. | 5 Proteins of unknown function that are similar to other proteins. | 0.709 |
| LCA_1525 | guaA | LCA_1525 | LCA_0139 | Small multidrug resistance efflux protein, SMR family. | Guanosine monophosphate synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP. | 0.491 |
| LCA_1525 | pepS | LCA_1525 | LCA_1522 | Small multidrug resistance efflux protein, SMR family. | Aminopeptidase S. | 0.417 |
| LCA_1525 | topA | LCA_1525 | LCA_0989 | Small multidrug resistance efflux protein, SMR family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.408 |
| LCA_1525 | topB | LCA_1525 | LCA_0761 | Small multidrug resistance efflux protein, SMR family. | DNA topoisomerase III. | 0.408 |
| guaA | LCA_1525 | LCA_0139 | LCA_1525 | Guanosine monophosphate synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP. | Small multidrug resistance efflux protein, SMR family. | 0.491 |
| guaA | topA | LCA_0139 | LCA_0989 | Guanosine monophosphate synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.521 |
| guaA | topB | LCA_0139 | LCA_0761 | Guanosine monophosphate synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP. | DNA topoisomerase III. | 0.521 |
| pepS | LCA_1523 | LCA_1522 | LCA_1523 | Aminopeptidase S. | 6 Protein of unknown function, without similarity to other proteins. | 0.723 |
| pepS | LCA_1524 | LCA_1522 | LCA_1524 | Aminopeptidase S. | 5 Proteins of unknown function that are similar to other proteins. | 0.449 |
| pepS | LCA_1525 | LCA_1522 | LCA_1525 | Aminopeptidase S. | Small multidrug resistance efflux protein, SMR family. | 0.417 |
| topA | LCA_1525 | LCA_0989 | LCA_1525 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Small multidrug resistance efflux protein, SMR family. | 0.408 |
| topA | guaA | LCA_0989 | LCA_0139 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Guanosine monophosphate synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP. | 0.521 |
page 1 of 2