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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagBCDP-glycerol:glycerophosphate glycerophosphotransferase (Teichoic acid biosynthesis protein B). (381 aa)    
Predicted Functional Partners:
tagD
Glycerol-3-phosphate cytidyltransferase (CDP-glycerol pyrophosphorylase) (Teichoic acid biosynthesis protein D).
 
  
 0.979
LCA_1575
Putative teichoic acid/polysaccharide export protein.
  
  
 0.810
LCA_1578
Putative teichoic acid/polysaccharide biosynthesis protein.
       0.793
LCA_1572
Putative teichoic acid/polysaccharide glycosyl transferase, family 2.
  
  
 0.791
LCA_1573
Putative teichoic acid/polysaccharide glycosyl transferase, group 1.
  
  
 0.788
LCA_1577
6 Protein of unknown function, without similarity to other proteins.
  
  
 0.788
CAI55814.1
Putative Glycosyl transferase, family 2.
  
 0.775
LCA_1579
Putative teichoic acid/polysaccharide export protein.
     
 0.723
tagO
Undecaprenyl-phosphate N-acetyl-glucosaminyl transferase.
  
 
 0.701
LCA_1580
Hypothetical integral membrane protein.
       0.627
Your Current Organism:
Lactobacillus sakei
NCBI taxonomy Id: 314315
Other names: L. sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei str. 23K, Lactobacillus sakei subsp. sakei strain 23K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.