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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dexBGlucan 1,6-alpha-glucosidase (dextran glucosidase). (548 aa)    
Predicted Functional Partners:
scrA
Sucrose-specific phosphotransferase system, enzyme IIBCA.
  
  
 0.944
scrR
Sucrose operon transcriptional regulator, LacI family.
  
  
 0.827
scrK
Fructokinase.
  
  
 0.792
nagE
N-acetylglucosamine and glucose-specific phosphotransferase system, enzyme IIABC.
  
  
 0.777
LCA_1198
Putative trehalose and glucose-specific phosphotransferase system, enzyme EIIA.
  
  
 0.777
LCA_1200
Putative trehalose and glucose-specific phosphotransferase system, enzyme IIBC.
 
  
 0.777
scrB
Sucrase-6-phosphate hydrolase (Sucrase, Invertase); Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
  
 0.726
fruA
Fructose-specific phosphotransferase system, enzyme IIABC.
     
 0.599
LCA_1789
Putative transcriptional regulator with a sugar-binding domain, LacI family.
  
  
 0.517
LCA_0068
Putative amino acid/polyamine antiporter (N-terminal fragment), authentic frameshift.
   
 0.480
Your Current Organism:
Lactobacillus sakei
NCBI taxonomy Id: 314315
Other names: L. sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei str. 23K, Lactobacillus sakei subsp. sakei strain 23K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.