Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KON47439.1Mechanosensitive ion channel; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
KON48789.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.902
KON46835.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.879
KON46623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.866
KON47117.1
Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.814
KON47958.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.809
KON46734.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.803
KON46495.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.800
KON47903.1
Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.794
KON47125.1
Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
  0.794
KON47894.1
Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.792
Your Current Organism:
Mariprofundus ferrooxydans
NCBI taxonomy Id: 314344
Other names: DSM 23021, M. ferrooxydans, Mariprofundus ferrooxydans Emerson et al. 2010, Siderooxidans marinum, strain PV-1
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