STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KON47066.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)    
Predicted Functional Partners:
KON48789.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.954
KON48347.1
Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.945
KON47861.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.913
KON48050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.901
KON47997.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.869
KON47045.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.866
KON46676.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.864
KON47657.1
Two-component response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.859
KON48125.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.854
KON48361.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.847
Your Current Organism:
Mariprofundus ferrooxydans
NCBI taxonomy Id: 314344
Other names: DSM 23021, M. ferrooxydans, Mariprofundus ferrooxydans Emerson et al. 2010, Siderooxidans marinum, strain PV-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.