Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KON46862.1 | KON47120.1 | AL013_10740 | AL013_09955 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.581 |
KON47120.1 | KON46862.1 | AL013_09955 | AL013_10740 | Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.581 |
KON47120.1 | KON48333.1 | AL013_09955 | AL013_03075 | Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyphosphate kinase 2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.581 |
KON47120.1 | KON48343.1 | AL013_09955 | AL013_03135 | Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Purine NTP phosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.539 |
KON47120.1 | cmoB | AL013_09955 | AL013_04850 | Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA methyltransferase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | 0.654 |
KON47120.1 | ubiA | AL013_09955 | AL013_10135 | Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.429 |
KON48333.1 | KON47120.1 | AL013_03075 | AL013_09955 | Polyphosphate kinase 2; Derived by automated computational analysis using gene prediction method: Protein Homology. | Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.581 |
KON48343.1 | KON47120.1 | AL013_03135 | AL013_09955 | Purine NTP phosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.539 |
cmoB | KON47120.1 | AL013_04850 | AL013_09955 | tRNA methyltransferase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.654 |
ubiA | KON47120.1 | AL013_10135 | AL013_09955 | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |