STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KB13_1035[M] COG2230 Cyclopropane fatty acid synthase and related methyltransferases. (342 aa)    
Predicted Functional Partners:
KB13_732
Conserved hypothetical protein, putative; [S] COG3752 Predicted membrane protein.
     0.867
KB13_699
Amine oxidase; [R] COG2907 Predicted NAD/FAD-binding protein.
  
 0.658
KB13_1050
[S] COG3496 Uncharacterized conserved protein.
 
    0.641
KB13_249
Lipocalin family protein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
 
     0.490
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
 
 0.425
Your Current Organism:
beta proteobacterium KB13
NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.